Archive: Duarte and Thompson-Peer Cas9 Ongoing... Public!

NMO-version:
PMID/DOI: 10.1101/2025.10.03.680356v1
Author(s): Katherine Thompson-Peer
URL: None
Email address: ktpeer@uci.edu
added by Nmo-Author 4 weeks ago!

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26 Folders (Experimental Groups) and 388 files are extracted from the uploaded Zip file (Please modify your file and re-upload if any change is required)

# Folder name Match File count File format
1 Fig2abc_classIddaE_uCas9M ✔ 12 traces
2 Fig1g_Cas9H ✔ 42 traces
3 Fig2abc_classIIIddaA_uCas9L ✔ 12 traces
4 NeuroMorphoMaterials ✔ 1 traces
5 Fig1ef_Cas9H ✔ 21 traces
6 Fig2abc_classIIIddaA_uCas9M ✔ 11 traces
7 Fig2abc_classiddaE_uCas9L ✔ 20 traces
8 Fig2abc_classIddaE_wt ✔ 13 traces
9 Fig1hi_wt ✔ 12 traces
10 Fig2abc_classIVddaC_uCas9VL ✔ 11 traces
11 Fig2abc_classIVddaC_wt ✔ 15 traces
12 Fig1ef_wt ✔ 11 traces
13 Fig2abc_classIVddaC_uCas9L ✔ 12 traces
14 Fig2abc_classIVddaC_uCas9M ✔ 21 traces
15 Fig2abc_classIIIddaA_uCas9VL ✔ 11 traces
16 Fig1ab_wt ✔ 7 traces
17 Fig2abc_classIIIddaA_wt ✔ 12 traces
18 Fig1cd_wt ✔ 10 xlsx, traces
19 Fig2abc_classIddaE_uCas9VL ✔ 21 traces
20 Fig2abc_classIIIddaA_Cas9H ✔ 12 traces
21 Fig1hi_Cas9H ✔ 12 traces
22 Fig2abc_classIVddaC_Cas9H ✔ 10 traces
23 Fig1g_wt ✔ 42 traces
24 Fig2abc_classIddaE_Cas9H ✔ 21 traces
25 Fig1cd_Cas9H ✔ 10 traces
26 Fig1ab_Cas9H ✔ 6 traces

- Please make sure to upload a single Zip file containing All your reconstruction files!

- If you have distinct experimental conditions (e.g. anatomical location, control vs. treatment/lesion, animal sex/age etc.) please separate each group of cells in a distinct folder and zip all the nested folders toghether.

- The groupings are supposed to follow a flat 1-level hierarchy. For example, if you have Male & Female, Hc & Cx, and young & adult, this should be organized into 8 distinct folders zipped together in a single upload. Please note the example below for your clarification.

- Please login for additional information. 

Sample 'yourExperiment.zip' (please choose a short name without special characters for your folders)
        |___ Male_Hc_young (folder containing swc/hoc/am/... files)
        |___ Male_Hc_adult (folder containing swc/hoc/am/... files)
        |___ Male_Cx_young (folder containing swc/hoc/am/... files)
        |___ Male_Cx_adult (folder containing swc/hoc/am/... files)
        |___ Female_Hc_young (folder containing swc/hoc/am/... files)
        |___ Female_Hc_adult (folder containing swc/hoc/am/... files)
        |___ Female_Cx_young (folder containing swc/hoc/am/... files)
        |___ Female_Cx_adult (folder containing swc/hoc/am/... files)

Neuron Groups: (26total, please login if you have a user account!)

Recently edited: Fig2abc_classIVddaC_wt , Fig2abc_classIVddaC_uC... , Fig2abc_classIVddaC_uC... , Fig2abc_classIVddaC_uC... , Fig2abc_classIVddaC_Cas9H , Fig1hi_Cas9H , Fig1g_wt
Fig1ab_Cas9H group with 6 cell(s)
New-terms Match New-lab
Fig1ab_wt group with 7 cell(s)
Match New-lab
Fig1cd_Cas9H group with 10 cell(s)
Match New-lab
Fig1cd_wt group with 10 cell(s)
Match New-lab
Fig1ef_Cas9H group with 21 cell(s)
New-terms Match New-lab
Fig1ef_wt group with 11 cell(s)
New-terms Match New-lab
Fig1g_Cas9H group with 42 cell(s)
Match New-lab
Fig1g_wt group with 42 cell(s)
Match New-lab
Fig1hi_Cas9H group with 12 cell(s)
Match New-lab
Fig1hi_wt group with 12 cell(s)
Match New-lab
Fig2abc_classIddaE_Cas9H group with 21 cell(s)
Match New-lab
Fig2abc_classiddaE_uCas9L group with 20 cell(s)
Match New-lab
Fig2abc_classIddaE_uCas9M group with 12 cell(s)
Match New-lab
Fig2abc_classIddaE_uCas9VL group with 21 cell(s)
Match New-lab
Fig2abc_classIddaE_wt group with 13 cell(s)
Match New-lab
Fig2abc_classIIIddaA_Cas9H group with 12 cell(s)
Match New-lab
Fig2abc_classIIIddaA_uCas9L group with 12 cell(s)
Match New-lab
Fig2abc_classIIIddaA_uCas9M group with 11 cell(s)
Match New-lab
Fig2abc_classIIIddaA_uCas9VL group with 11 cell(s)
Match New-lab
Fig2abc_classIIIddaA_wt group with 12 cell(s)
Match New-lab
Fig2abc_classIVddaC_Cas9H group with 10 cell(s)
Match New-lab
Fig2abc_classIVddaC_uCas9L group with 12 cell(s)
Match New-lab
Fig2abc_classIVddaC_uCas9M group with 21 cell(s)
Match New-lab
Fig2abc_classIVddaC_uCas9VL group with 11 cell(s)
Match New-lab
Fig2abc_classIVddaC_wt group with 15 cell(s)
Match New-lab
NeuroMorphoMaterials group with 1 cell(s)
Match
Control Checks:

  • Dataset has new terms!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal5 LA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-20 animal6 RA2.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal11 RA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-18 animal11 RA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal10 LA5.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal2 RA4.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal11 RA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal5 LA4.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal10 LA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal7 LA3.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal2 RA2.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-18 animal1 LA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal5 LA5.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-20 animal11 RA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-20 animal11 RA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal12 RA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal12 RA3.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal15 RA5.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-20 animal6 RA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal6 LA2.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal11 RA5.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal15 RA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal12 RA4.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-20 animal1 RA2.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal10 LA4.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal15 RA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-18 animal6 LA2.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-21 animal1 RA4.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal7 LA2.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-18 animal6 LA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal6 LA3.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal7 LA4.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal5 LA2.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal11 RA4.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-18 animal1 LA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-21 animal1 RA3.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal6 LA4.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-20 animal1 RA3.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal15 RA4.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-21 animal1 RA2.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-11-18 animal11 RA4.traces) in the zip file!
  • There are multiple occurrences of (wt 2024-12-10 animal6 LA5.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-11-21 animal2 RA3.traces) in the zip file!
  • There are multiple occurrences of (Cas9H 2024-12-10 animal10 LA3.traces) in the zip file!
Recent Actions:

Carolina Csv CSV is generated for the archive Jul/16
Giorgio Csv CSV is generated for the archive Jul/15
Nmo-Author Edit Group (Fig2abc_classIVddaC_wt) is modified Jul/14
Nmo-Author Edit Group (Fig2abc_classIVddaC_uCas9VL) is modified Jul/14
Nmo-Author Edit Group (Fig2abc_classIVddaC_uCas9M) is modified Jul/14
Nmo-Author Edit Group (Fig2abc_classIVddaC_uCas9L) is modified Jul/14
Nmo-Author Edit Group (Fig2abc_classIVddaC_Cas9H) is modified Jul/14
Nmo-Author Edit Group (Fig1hi_Cas9H) is modified Jul/14
Nmo-Author Edit Group (Fig1g_wt) is modified Jul/14
Nmo-Author Edit Group (Fig1g_Cas9H) is modified Jul/14
Nmo-Author Edit Group (Fig1ef_wt) is modified Jul/14
Nmo-Author Edit Group (Fig1ef_Cas9H) is modified Jul/14
Nmo-Author Edit Group (Fig1cd_wt) is modified Jul/14
Nmo-Author Edit Group (Fig1cd_Cas9H) is modified Jul/14
Nmo-Author Edit Group (Fig1ab_wt) is modified Jul/14
Nmo-Author Edit Propagate change — Fig1cd_Cas9H Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIddaE_Cas9H Jul/14
Nmo-Author Edit Propagate change — Fig1g_wt Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIVddaC_Cas9H Jul/14
Nmo-Author Edit Propagate change — Fig1hi_Cas9H Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIIIddaA_Cas9H Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIddaE_uCas9VL Jul/14
Nmo-Author Edit Propagate change — Fig1cd_wt Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIIIddaA_wt Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIIIddaA_uCas9VL Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIVddaC_uCas9M Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIVddaC_uCas9L Jul/14
Nmo-Author Edit Propagate change — Fig1ef_wt Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIVddaC_wt Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIVddaC_uCas9VL Jul/14
Nmo-Author Edit Propagate change — Fig1hi_wt Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIddaE_wt Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classiddaE_uCas9L Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIIIddaA_uCas9M Jul/14
Nmo-Author Edit Propagate change — Fig1ef_Cas9H Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIIIddaA_uCas9L Jul/14
Nmo-Author Edit Propagate change — Fig1g_Cas9H Jul/14
Nmo-Author Edit Propagate change — Fig2abc_classIddaE_uCas9M Jul/14
Nmo-Author Edit Group (Fig1ab_wt) is modified Jul/14
Nmo-Author Edit Group (Fig1ab_Cas9H) is modified Jul/14
Nmo-Author Creation Neuronal groups are made based on the structure of the zip file Jul/14
Nmo-Author Upload Reconstruction file uploaded Jul/14
Nmo-Author Creation Dataset created Jul/13

Reviews:

On July 14, 2026, Nmo-Author says:

Folder titles refer to figure panels of the G3 manuscript of this data.